Variovorax sp. CF313

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. CF313 is a rod-shaped bacterium characterized by its single replicon. This trait suggests a streamlined genetic organization, which may contribute to its adaptability and survival in various environments. The genomic data for Variovorax sp. CF313 is available under the accession number AKIW00000000.1, indicating that it has been sequenced and cataloged for further study. The rod shape of Variovorax sp. CF313 is typical of many bacteria, allowing for efficient movement and nutrient absorption in diverse habitats. This morphology may provide advantages in biofilm formation and colonization of surfaces, which is often a critical factor in the ecological roles of bacteria within their environments. The ecological implications of Variovorax sp. CF313 could be significant, especially in the context of bioremediation, given the genus Variovorax is known for its ability to degrade various organic pollutants. The single replicon may also suggest an efficient metabolic pathway, potentially allowing Variovorax sp. CF313 to utilize a range of substrates effectively. This flexibility could enable it to occupy various ecological niches, contributing to nutrient cycling and ecosystem health. In summary, Variovorax sp. CF313 is a rod-shaped bacterium with a single replicon, suggesting adaptability and metabolic efficiency, which may play a role in its ecological function, particularly in bioremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. CF313
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. CF313


Gene Summary

Adenine Count

1000761 bp

Thymine Count

998408 bp

Guanine Count

2015388 bp

Cytosine Count

2014329 bp

Genome Length

6029174 bp

Protein-coding Genes

5584 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n6-adenine-specific methylasePMI12_04263Not AvailableNegative4453192 - 445384523002.5
lysine efflux permeasePMI12_04264Not AvailableNegative4453880 - 445451521725.1
transcriptional regulator, argp familyPMI12_04265Not AvailablePositive4454591 - 445550532348.1
putative zn-dependent peptidasePMI12_04266Not AvailableNegative4455516 - 445688648694.4
putative zn-dependent peptidasePMI12_04267Not AvailableNegative4456905 - 445818846866.8
signal recognition particle-docking protein ftsyPMI12_04268Not AvailablePositive4458377 - 445957341531.1
hypothetical proteinPMI12_04269Not AvailableNegative4459661 - 446070735553.7
signal transduction histidine kinasePMI12_04270Not AvailableNegative4460877 - 446270666225.7
response regulator containing a chey-like receiver domain and an hth dna-binding domainPMI12_04271Not AvailableNegative4462709 - 446342824836.9
putative membrane proteinPMI12_04272Not AvailablePositive4463610 - 446407417023.3

Displaying genes 4201 – 4210 of 5654 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.