Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n6-adenine-specific methylase | PMI12_04263 | Not Available | Negative | 4453192 - 4453845 | 23002.5 |
| lysine efflux permease | PMI12_04264 | Not Available | Negative | 4453880 - 4454515 | 21725.1 |
| transcriptional regulator, argp family | PMI12_04265 | Not Available | Positive | 4454591 - 4455505 | 32348.1 |
| putative zn-dependent peptidase | PMI12_04266 | Not Available | Negative | 4455516 - 4456886 | 48694.4 |
| putative zn-dependent peptidase | PMI12_04267 | Not Available | Negative | 4456905 - 4458188 | 46866.8 |
| signal recognition particle-docking protein ftsy | PMI12_04268 | Not Available | Positive | 4458377 - 4459573 | 41531.1 |
| hypothetical protein | PMI12_04269 | Not Available | Negative | 4459661 - 4460707 | 35553.7 |
| signal transduction histidine kinase | PMI12_04270 | Not Available | Negative | 4460877 - 4462706 | 66225.7 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_04271 | Not Available | Negative | 4462709 - 4463428 | 24836.9 |
| putative membrane protein | PMI12_04272 | Not Available | Positive | 4463610 - 4464074 | 17023.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
