Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein, 4-oxalocrotonate tautomerase | PMI12_04253 | Not Available | Positive | 4444413 - 4444811 | 14366.1 |
| hypothetical protein | PMI12_04254 | Not Available | Positive | 4444857 - 4446215 | 48895.4 |
| n-acyl-d-aspartate/d-glutamate deacylase | PMI12_04255 | Not Available | Positive | 4446354 - 4447949 | 56412.2 |
| fructose-2,6-bisphosphatase | PMI12_04256 | Not Available | Negative | 4447960 - 4448658 | 25892.6 |
| putative hydrolase or acyltransferase of alpha/beta superfamily | PMI12_04257 | Not Available | Positive | 4448700 - 4449410 | 25529.1 |
| pyroglutamyl-peptidase i | PMI12_04258 | Not Available | Negative | 4449425 - 4450087 | 23473.6 |
| putative lactam utilization protein b-like protein | PMI12_04259 | Not Available | Negative | 4450113 - 4450853 | 26329.5 |
| biotin-dependent carboxylase-like protein | PMI12_04260 | Not Available | Negative | 4450889 - 4451887 | 34772.0 |
| tigr00370 family protein | PMI12_04261 | Not Available | Negative | 4451884 - 4452531 | 23072.9 |
| pantetheine-phosphate adenylyltransferase | PMI12_04262 | Not Available | Negative | 4452645 - 4453148 | 18430.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
