Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type branched-chain amino acid transport system, atpase component | PMI12_04223 | Not Available | Negative | 4413749 - 4414465 | 25549.2 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_04224 | Not Available | Negative | 4414462 - 4415181 | 25852.5 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_04225 | Not Available | Negative | 4415194 - 4416447 | 44530.1 |
| nad-dependent aldehyde dehydrogenase | PMI12_04226 | Not Available | Negative | 4416492 - 4417970 | 53123.7 |
| hypothetical protein | PMI12_04227 | Not Available | Negative | 4418089 - 4419096 | 37760.5 |
| hypothetical protein | PMI12_04228 | Not Available | Negative | 4419111 - 4419623 | 18995.6 |
| transcriptional regulator | PMI12_04229 | Not Available | Negative | 4419737 - 4420753 | 37383.2 |
| tetratricopeptide repeat protein | PMI12_04230 | Not Available | Positive | 4420827 - 4421918 | 38313.4 |
| hypothetical protein | PMI12_04231 | Not Available | Positive | 4421918 - 4423354 | 51863.6 |
| flp pilus assembly protein, pilin flp | PMI12_04232 | Not Available | Positive | 4423778 - 4423966 | 6480.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
