Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_04213 | Not Available | Negative | 4405336 - 4405698 | 12767.3 |
| transcriptional regulator | PMI12_04214 | Not Available | Negative | 4405711 - 4406412 | 25412.2 |
| hypothetical protein | PMI12_04215 | Not Available | Positive | 4406515 - 4407027 | 18790.1 |
| 3-oxoadipyl-coa thiolase | PMI12_04216 | Not Available | Negative | 4407070 - 4408275 | 41702.3 |
| 3-oxoacid coa-transferase, b subunit | PMI12_04217 | Not Available | Negative | 4408324 - 4408971 | 22835.6 |
| 3-oxoacid coa-transferase, a subunit | PMI12_04218 | Not Available | Negative | 4408968 - 4409669 | 24661.8 |
| beta-ketoadipate pathway transcriptional regulator, pcar/pcau/pobr family | PMI12_04219 | Not Available | Positive | 4409800 - 4410585 | 28274.4 |
| hypothetical protein | PMI12_04220 | Not Available | Negative | 4410710 - 4411717 | 34424.9 |
| abc-type branched-chain amino acid transport system, permease component | PMI12_04221 | Not Available | Negative | 4411865 - 4412887 | 36411.2 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_04222 | Not Available | Negative | 4412893 - 4413756 | 30034.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
