Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase, beta-lactamase superfamily iii | PMI12_04203 | Not Available | Negative | 4394995 - 4395954 | 34919.7 |
| hypothetical protein | PMI12_04204 | Not Available | Negative | 4395960 - 4396604 | 24424.5 |
| hypothetical protein | PMI12_04205 | Not Available | Negative | 4396702 - 4397925 | 44619.5 |
| membrane protease subunit, stomatin/prohibitin | PMI12_04206 | Not Available | Negative | 4398216 - 4399367 | 42702.9 |
| sigma54-dependent transcription regulator with aaa-type atpase domain | PMI12_04207 | Not Available | Positive | 4400072 - 4401679 | 59327.8 |
| hypothetical protein tyrosine phosphatase | PMI12_04208 | Not Available | Positive | 4401696 - 4402553 | 31451.7 |
| hypothetical protein | PMI12_04209 | Not Available | Positive | 4402560 - 4403132 | 21014.0 |
| hypothetical protein | PMI12_04210 | Not Available | Positive | 4403129 - 4403989 | 31702.8 |
| putative ornithine cyclodeaminase, mu-crystallin | PMI12_04211 | Not Available | Positive | 4403986 - 4404945 | 33622.1 |
| hypothetical protein | PMI12_04212 | Not Available | Positive | 4405079 - 4405309 | 8251.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
