Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycyl-trna synthetase, tetrameric type, alpha subunit | PMI12_04183 | Not Available | Positive | 4374863 - 4375771 | 34449.8 |
| putative membrane-bound metal-dependent hydrolase | PMI12_04184 | Not Available | Positive | 4375790 - 4376341 | 19732.6 |
| glycyl-trna synthetase, tetrameric type, beta subunit | PMI12_04185 | Not Available | Positive | 4376437 - 4378590 | 76341.1 |
| histidinol-phosphate phosphatase family protein | PMI12_04186 | Not Available | Positive | 4378613 - 4379206 | 21042.5 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | PMI12_04187 | Not Available | Positive | 4379206 - 4379973 | 28585.5 |
| putative metal-dependent hydrolase | PMI12_04188 | Not Available | Positive | 4380138 - 4380974 | 31067.3 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_04189 | Not Available | Negative | 4380993 - 4381763 | 26956.2 |
| 23s rna-specific pseudouridylate synthase | PMI12_04190 | Not Available | Negative | 4381838 - 4382758 | 34859.1 |
| protein kinase family protein | PMI12_04191 | Not Available | Negative | 4382755 - 4384059 | 46658.1 |
| zn-dependent hydrolase, glyoxylase | PMI12_04192 | Not Available | Negative | 4384069 - 4385139 | 39734.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
