Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytosine deaminase-like metal-dependent hydrolase | PMI12_04173 | Not Available | Negative | 4364858 - 4366129 | 46119.4 |
| hypothetical protein | PMI12_04174 | Not Available | Negative | 4366126 - 4366230 | 3801.49 |
| putative secreted protein | PMI12_04175 | Not Available | Positive | 4366536 - 4367057 | 16972.0 |
| p pilus assembly protein, chaperone papd | PMI12_04176 | Not Available | Positive | 4367072 - 4367806 | 26259.8 |
| p pilus assembly protein, porin papc | PMI12_04177 | Not Available | Positive | 4367841 - 4370168 | 82125.6 |
| putative secreted protein | PMI12_04178 | Not Available | Positive | 4370165 - 4371193 | 35069.9 |
| hypothetical protein | PMI12_04179 | Not Available | Positive | 4371359 - 4371793 | 15384.9 |
| transcriptional regulator | PMI12_04180 | Not Available | Negative | 4371872 - 4372504 | 23530.6 |
| l-asparaginase type ii family protein | PMI12_04181 | Not Available | Positive | 4372700 - 4373770 | 37676.2 |
| membrane-associated phospholipid phosphatase | PMI12_04182 | Not Available | Negative | 4373879 - 4374691 | 28488.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
