Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyphenylpyruvate dioxygenase | PMI12_04163 | Not Available | Negative | 4354755 - 4355882 | 41754.6 |
| transcriptional regulator | PMI12_04164 | Not Available | Positive | 4356025 - 4356498 | 17805.7 |
| acetyltransferase, ribosomal protein n-acetylase | PMI12_04165 | Not Available | Positive | 4356608 - 4357336 | 26568.9 |
| putative mg2+ and co2+ transporter corc | PMI12_04166 | Not Available | Positive | 4357436 - 4358314 | 32185.2 |
| apolipoprotein n-acyltransferase | PMI12_04167 | Not Available | Positive | 4358314 - 4359882 | 55975.3 |
| fad/fmn-dependent dehydrogenase | PMI12_04168 | Not Available | Negative | 4359886 - 4361256 | 49714.3 |
| abc-type nitrate/sulfonate/bicarbonate transport system, permease component | PMI12_04169 | Not Available | Negative | 4361265 - 4362074 | 29229.0 |
| abc-type nitrate/sulfonate/bicarbonate transport system, atpase component | PMI12_04170 | Not Available | Negative | 4362071 - 4362901 | 30306.0 |
| abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | PMI12_04171 | Not Available | Negative | 4362914 - 4363897 | 35535.7 |
| hypothetical protein, putative amidase | PMI12_04172 | Not Available | Negative | 4363969 - 4364832 | 31385.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
