Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative redox protein, regulator of disulfide bond formation | PMI12_04153 | Not Available | Negative | 4344848 - 4345249 | 14533.3 |
| transcriptional regulator | PMI12_04154 | Not Available | Negative | 4345275 - 4345742 | 17510.5 |
| glycine/d-amino acid oxidase, deaminating | PMI12_04155 | Not Available | Positive | 4345871 - 4347172 | 46840.3 |
| ring-hydroxylating dioxygenase, large terminal subunit | PMI12_04156 | Not Available | Negative | 4347185 - 4348267 | 40920.5 |
| abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | PMI12_04157 | Not Available | Positive | 4348602 - 4349627 | 37000.3 |
| cytosine/adenosine deaminase | PMI12_04158 | Not Available | Positive | 4349624 - 4350151 | 19091.4 |
| zn-dependent hydrolase, glyoxylase | PMI12_04159 | Not Available | Negative | 4350273 - 4351205 | 33671.1 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI12_04160 | Not Available | Negative | 4351206 - 4352897 | 61364.3 |
| phenylalanine-4-hydroxylase, monomeric form | PMI12_04161 | Not Available | Negative | 4353018 - 4353893 | 32680.8 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_04162 | Not Available | Negative | 4353913 - 4354716 | 28916.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
