Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase-like enzyme | PMI12_04113 | Not Available | Positive | 4293136 - 4294389 | 45641.7 |
| hypothetical protein | PMI12_04114 | Not Available | Negative | 4294414 - 4295139 | 26130.0 |
| theronine dehydrogenase-like zn-dependent dehydrogenase | PMI12_04115 | Not Available | Negative | 4295283 - 4296356 | 37791.2 |
| lactate dehydrogenase-like oxidoreductase | PMI12_04116 | Not Available | Negative | 4296370 - 4297323 | 33849.8 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_04117 | Not Available | Positive | 4297451 - 4298230 | 26808.3 |
| beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase | PMI12_04118 | Not Available | Positive | 4298261 - 4299163 | 30815.1 |
| hypothetical protein | PMI12_04119 | Not Available | Positive | 4299207 - 4299545 | 12829.4 |
| glycosyl hydrolase, glucoamylase | PMI12_04120 | Not Available | Negative | 4299511 - 4301433 | 71374.4 |
| hypothetical protein | PMI12_04121 | Not Available | Negative | 4301519 - 4301764 | 9373.1 |
| phosphopantetheinyl transferase | PMI12_04122 | Not Available | Positive | 4302000 - 4302782 | 29820.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
