Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tannase and feruloyl esterase | PMI12_04103 | Not Available | Positive | 4284272 - 4284514 | 8656.25 |
| hypothetical protein | PMI12_04104 | Not Available | Positive | 4284568 - 4285158 | 21166.6 |
| transcriptional regulator | PMI12_04105 | Not Available | Negative | 4285364 - 4285978 | 21446.3 |
| hypothetical protein | PMI12_04106 | Not Available | Positive | 4286105 - 4286521 | 14711.5 |
| hypothetical protein | PMI12_04107 | Not Available | Positive | 4286716 - 4286997 | 10229.2 |
| dihydrofolate reductase | PMI12_04108 | Not Available | Negative | 4287254 - 4287910 | 23752.5 |
| transcriptional regulator containing an amidase domain and an arac-type dna-binding hth domain | PMI12_04109 | Not Available | Negative | 4288105 - 4289109 | 36928.4 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_04110 | Not Available | Positive | 4289304 - 4290095 | 27360.6 |
| hypothetical protein | PMI12_04111 | Not Available | Positive | 4290130 - 4291368 | 44721.4 |
| conserved protein of dim6/ntab family | PMI12_04112 | Not Available | Positive | 4291383 - 4293116 | 63602.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
