Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI12_04083 | Not Available | Negative | 4260070 - 4261683 | 57895.8 |
| transcriptional regulator | PMI12_04084 | Not Available | Positive | 4261769 - 4262458 | 25556.5 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_04085 | Not Available | Positive | 4262485 - 4263744 | 45030.0 |
| sulfite reductase, alpha subunit (flavoprotein) | PMI12_04086 | Not Available | Positive | 4263899 - 4267117 | 118626.0 |
| hypothetical protein | PMI12_04087 | Not Available | Negative | 4267133 - 4267912 | 28001.6 |
| transcriptional regulator | PMI12_04088 | Not Available | Negative | 4268002 - 4268637 | 23425.1 |
| hypothetical protein | PMI12_04089 | Not Available | Negative | 4268660 - 4269088 | 15167.5 |
| hypothetical protein | PMI12_04090 | Not Available | Negative | 4269141 - 4269695 | 18997.9 |
| acyltransferase, ws/dgat/mgat | PMI12_04091 | Not Available | Negative | 4269859 - 4271529 | 59656.4 |
| serine protease, s9a family peptidase | PMI12_04092 | Not Available | Positive | 4271892 - 4273949 | 76457.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
