Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | PMI12_04043 | Not Available | Negative | 4214837 - 4215724 | 32047.2 |
| fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase family | PMI12_04044 | Not Available | Positive | 4215901 - 4217265 | 50460.5 |
| conserved protein of dim6/ntab family | PMI12_04045 | Not Available | Positive | 4217281 - 4217787 | 17589.9 |
| hypothetical protein | PMI12_04046 | Not Available | Positive | 4217825 - 4218811 | 34207.7 |
| citrate lyase beta subunit | PMI12_04047 | Not Available | Positive | 4218865 - 4219863 | 36408.0 |
| putative acyl-coa transferase/carnitine dehydratase | PMI12_04048 | Not Available | Positive | 4219865 - 4221115 | 44839.9 |
| citrate lyase beta subunit | PMI12_04049 | Not Available | Positive | 4221150 - 4222157 | 36622.8 |
| transcriptional regulator | PMI12_04050 | Not Available | Positive | 4222205 - 4223092 | 32074.7 |
| alpha-hydroxyacid dehydrogenase, fmn-dependent l-lactate dehydrogenase | PMI12_04051 | Not Available | Positive | 4223238 - 4224425 | 43048.8 |
| hypothetical protein | PMI12_04052 | Not Available | Positive | 4224440 - 4225408 | 34316.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
