Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin activation/secretion protein | PMI12_04033 | Not Available | Negative | 4203727 - 4204542 | 29288.7 |
| hypothetical protein | PMI12_04034 | Not Available | Negative | 4204630 - 4205253 | 21886.7 |
| hypothetical protein | PMI12_04035 | Not Available | Negative | 4205270 - 4205446 | 6543.74 |
| hypothetical protein | PMI12_04036 | Not Available | Negative | 4205443 - 4205532 | 3383.11 |
| peptidase c39 family | PMI12_04037 | Not Available | Negative | 4205913 - 4206962 | 36642.7 |
| aspartate/tyrosine/aromatic aminotransferase | PMI12_04038 | Not Available | Negative | 4208415 - 4209599 | 43751.4 |
| transcriptional regulator | PMI12_04039 | Not Available | Negative | 4209860 - 4210810 | 34327.2 |
| dmt(drug/metabolite transporter) superfamily permease | PMI12_04040 | Not Available | Positive | 4211018 - 4211845 | 30089.1 |
| arabinose efflux permease family protein | PMI12_04041 | Not Available | Positive | 4212082 - 4213383 | 47107.1 |
| acetylornithine deacetylase arge | PMI12_04042 | Not Available | Positive | 4213470 - 4214636 | 42391.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
