Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 4184008 - 4184095 | Not Available |
| putative oxygen-independent coproporphyrinogen iii oxidase | PMI12_04014 | Not Available | Negative | 4184128 - 4185390 | 46756.7 |
| xanthosine triphosphate pyrophosphatase | PMI12_04015 | Not Available | Negative | 4185390 - 4185989 | 20889.1 |
| ribonuclease ph | PMI12_04016 | Not Available | Negative | 4185993 - 4186724 | 25646.8 |
| serine/threonine protein phosphatase | PMI12_04017 | Not Available | Negative | 4186766 - 4187674 | 32947.2 |
| serine/threonine protein kinase | PMI12_04018 | Not Available | Negative | 4187679 - 4188752 | 40108.8 |
| tigr00255 family protein | PMI12_04019 | Not Available | Positive | 4188778 - 4189701 | 33479.3 |
| guanylate kinase | PMI12_04020 | Not Available | Positive | 4189716 - 4190336 | 23035.5 |
| dna-directed rna polymerase, omega subunit | PMI12_04021 | Not Available | Positive | 4190376 - 4190579 | 7388.26 |
| (p)ppgpp synthetase, rela/spot family | PMI12_04022 | Not Available | Positive | 4190673 - 4192928 | 83179.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
