Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_03970 | Not Available | Positive | 4123752 - 4124345 | 22619.8 |
| hypothetical protein | PMI12_03994 | Not Available | Negative | 4141467 - 4141700 | 8697.8 |
| ap2 domain-containing protein | PMI12_03995 | Not Available | Negative | 4141915 - 4142757 | 31133.9 |
| hemolysin activation/secretion protein | PMI12_03996 | Not Available | Negative | 4142764 - 4144467 | 61827.8 |
| hypothetical protein | PMI12_03997 | Not Available | Negative | 4144555 - 4145157 | 21315.9 |
| filamentous hemagglutinin family n-terminal domain containing protein | PMI12_03998 | Not Available | Negative | 4145799 - 4155965 | 334495.0 |
| hypothetical protein | PMI12_03999 | Not Available | Positive | 4156423 - 4156848 | 16391.5 |
| hypothetical protein | PMI12_04000 | Not Available | Negative | 4157173 - 4158207 | 37462.3 |
| hypothetical protein | PMI12_04001 | Not Available | Positive | 4158548 - 4160116 | 57818.6 |
| hypothetical protein | PMI12_04002 | Not Available | Positive | 4160113 - 4162548 | 87927.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
