Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose efflux permease family protein | PMI12_03900 | Not Available | Positive | 4053694 - 4054920 | 43258.7 |
| hypothetical protein | PMI12_03901 | Not Available | Positive | 4054951 - 4055079 | 4705.82 |
| hypothetical protein | PMI12_03902 | Not Available | Positive | 4055111 - 4055662 | 19252.0 |
| dihydrodipicolinate synthase | PMI12_03903 | Not Available | Positive | 4055741 - 4056631 | 31793.6 |
| putative lipoprotein | PMI12_03904 | Not Available | Positive | 4056748 - 4057827 | 39602.9 |
| metal-dependent hydrolase, beta-lactamase superfamily i | PMI12_03905 | Not Available | Positive | 4057833 - 4058609 | 27731.8 |
| hypothetical protein | PMI12_03906 | Not Available | Negative | 4058689 - 4058949 | 8067.51 |
| hypothetical protein | PMI12_03907 | Not Available | Negative | 4059045 - 4059548 | 18711.0 |
| hypothetical protein | PMI12_03908 | Not Available | Negative | 4059538 - 4060680 | 42063.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | PMI12_03909 | Not Available | Positive | 4060695 - 4061219 | 18895.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
