Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_03890 | Not Available | Positive | 4041576 - 4043285 | 64501.9 |
| nicotinamidase-like amidase | PMI12_03891 | Not Available | Negative | 4043286 - 4043816 | 19148.6 |
| pgap1-like protein | PMI12_03892 | Not Available | Negative | 4043839 - 4045431 | 58426.2 |
| putative zn-dependent hydrolase of beta-lactamase | PMI12_03893 | Not Available | Positive | 4045654 - 4046775 | 41434.0 |
| hypothetical protein | PMI12_03894 | Not Available | Negative | 4046772 - 4047293 | 18680.4 |
| hypothetical protein | PMI12_03895 | Not Available | Negative | 4047341 - 4047532 | 7205.81 |
| dna topoisomerase iv, a subunit, proteobacterial | PMI12_03896 | Not Available | Negative | 4047532 - 4049943 | 86600.6 |
| soluble lytic murein transglycosylase-like protein | PMI12_03897 | Not Available | Negative | 4050028 - 4050954 | 32584.0 |
| type iia topoisomerase (dna gyrase/topo ii, topoisomerase iv), b subunit | PMI12_03898 | Not Available | Negative | 4050969 - 4052966 | 72339.3 |
| protein of unknown function (duf2846) | PMI12_03899 | Not Available | Negative | 4053058 - 4053513 | 15766.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
