Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| camp-binding protein | PMI12_03870 | Not Available | Positive | 4022268 - 4023050 | 28585.2 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_03871 | Not Available | Positive | 4023507 - 4023680 | 6346.69 |
| camp-binding protein | PMI12_03872 | Not Available | Positive | 4023700 - 4024455 | 27946.9 |
| transcriptional regulator | PMI12_03873 | Not Available | Positive | 4024887 - 4025867 | 36180.4 |
| acetyltransferase | PMI12_03874 | Not Available | Positive | 4025946 - 4026407 | 17461.6 |
| cupin domain-containing protein | PMI12_03875 | Not Available | Positive | 4026488 - 4026928 | 15596.5 |
| hypothetical protein | PMI12_03876 | Not Available | Negative | 4026967 - 4027308 | 11431.5 |
| type ii secretory pathway, atpase pule/tfp pilus assembly pathway, atpase pilb | PMI12_03877 | Not Available | Positive | 4027470 - 4029371 | 70010.4 |
| glycogen debranching enzyme | PMI12_03878 | Not Available | Positive | 4029418 - 4030617 | 44807.2 |
| hypothetical protein | PMI12_03879 | Not Available | Negative | 4030636 - 4030854 | 7423.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
