Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_03860 | Not Available | Negative | 4009422 - 4009910 | 17784.6 |
| methylase involved in ubiquinone/menaquinone biosynthesis | PMI12_03861 | Not Available | Positive | 4010055 - 4011116 | 38461.5 |
| putative small metal-binding protein | PMI12_03862 | Not Available | Positive | 4011136 - 4011357 | 7856.25 |
| aerobic-type carbon monoxide dehydrogenase, small subunit coxs/cuts-like protein | PMI12_03863 | Not Available | Positive | 4011543 - 4012046 | 17415.2 |
| aerobic-type carbon monoxide dehydrogenase, large subunit coxl/cutl-like protein | PMI12_03864 | Not Available | Positive | 4012043 - 4014295 | 79165.9 |
| cytochrome c, mono- and diheme variants family | PMI12_03865 | Not Available | Positive | 4014292 - 4015596 | 46328.7 |
| hypothetical protein | PMI12_03866 | Not Available | Positive | 4015648 - 4016025 | 13703.2 |
| outer membrane autotransporter barrel domain-containing protein | PMI12_03867 | Not Available | Positive | 4016397 - 4019498 | 96936.9 |
| putative hydrolase or acyltransferase of alpha/beta superfamily | PMI12_03868 | Not Available | Negative | 4019526 - 4020527 | 35369.3 |
| eal domain-containing protein | PMI12_03869 | Not Available | Positive | 4020861 - 4022237 | 49980.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
