Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type metal ion transport system, permease component | PMI12_03840 | Not Available | Negative | 3986253 - 3986915 | 23415.5 |
| abc-type metal ion transport system, atpase component | PMI12_03841 | Not Available | Negative | 3986908 - 3987780 | 31961.7 |
| lipoprotein, yaec family | PMI12_03842 | Not Available | Positive | 3987978 - 3988832 | 30681.0 |
| peptide chain release factor 2 | PMI12_03843 | Not Available | Positive | 3989241 - 3990143 | 33515.2 |
| haloacid dehalogenase superfamily protein, subfamily ia, variant 3 with third motif having dd or ed | PMI12_03844 | Not Available | Positive | 3990143 - 3990814 | 24346.1 |
| aminopeptidase n | PMI12_03845 | Not Available | Positive | 3990801 - 3993497 | 99940.9 |
| fructose-1,6-bisphosphatase | PMI12_03846 | Not Available | Positive | 3993521 - 3994534 | 37517.1 |
| Trna-thr | Not Available | Not Available | Positive | 3994560 - 3994635 | Not Available |
| putative homoserine kinase type ii (protein kinase fold) | PMI12_03848 | Not Available | Negative | 3994863 - 3995792 | 33970.8 |
| abc-type multidrug transport system, atpase and permease component | PMI12_03849 | Not Available | Negative | 3995808 - 3997610 | 63890.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
