Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf2817) | PMI12_03790 | Not Available | Negative | 3940046 - 3941140 | 39700.8 |
| amidohydrolase | PMI12_03791 | Not Available | Negative | 3941148 - 3942350 | 42923.4 |
| cytosine/adenosine deaminase | PMI12_03792 | Not Available | Negative | 3942426 - 3942923 | 17713.0 |
| glycerophosphoryl diester phosphodiesterase | PMI12_03793 | Not Available | Negative | 3942944 - 3944134 | 42919.8 |
| acetylornithine deacetylase arge | PMI12_03794 | Not Available | Positive | 3944240 - 3945406 | 42010.0 |
| putative membrane protein | PMI12_03795 | Not Available | Positive | 3945575 - 3946798 | 44759.0 |
| hypothetical protein | PMI12_03796 | Not Available | Positive | 3946917 - 3948569 | 58320.2 |
| mhyt domain-containing protein | PMI12_03797 | Not Available | Positive | 3948705 - 3949478 | 26458.4 |
| acetyl-coa carboxylase, carboxyltransferase component (subunits alpha and beta) | PMI12_03798 | Not Available | Positive | 3949573 - 3951183 | 56994.5 |
| acetyl/propionyl-coa carboxylase, alpha subunit | PMI12_03799 | Not Available | Positive | 3951180 - 3953129 | 68656.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
