Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa hydrolase | PMI12_03780 | Not Available | Positive | 3930933 - 3931382 | 15970.2 |
| poly(hydroxyalkanoate) granule-associated protein | PMI12_03781 | Not Available | Positive | 3931476 - 3931952 | 16716.9 |
| transcriptional regulator | PMI12_03782 | Not Available | Positive | 3932095 - 3932814 | 27115.4 |
| hypothetical protein | PMI12_03783 | Not Available | Positive | 3932821 - 3933660 | 30251.3 |
| acyl-coa-binding protein | PMI12_03784 | Not Available | Positive | 3933725 - 3933982 | 9358.95 |
| putative acyl-coa transferase/carnitine dehydratase | PMI12_03785 | Not Available | Negative | 3933992 - 3935233 | 43099.8 |
| putative polyhydroxyalkanoic acid system protein | PMI12_03786 | Not Available | Negative | 3935280 - 3935594 | 11484.6 |
| putative aminopeptidase | PMI12_03787 | Not Available | Negative | 3935587 - 3936711 | 41433.7 |
| anaerobic dehydrogenase, typically selenocysteine-containing | PMI12_03788 | Not Available | Negative | 3936708 - 3938771 | 74953.3 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_03789 | Not Available | Positive | 3938825 - 3939952 | 39744.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
