Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase, f0 subunit c | PMI12_03770 | Not Available | Positive | 3921290 - 3921529 | 8168.18 |
| acyl-coa thioesterase | PMI12_03771 | Not Available | Negative | 3921544 - 3922431 | 32621.1 |
| hypothetical protein | PMI12_03772 | Not Available | Negative | 3922530 - 3923243 | 25663.7 |
| hypothetical protein | PMI12_03773 | Not Available | Negative | 3923243 - 3924613 | 48051.1 |
| hypothetical protein | PMI12_03774 | Not Available | Negative | 3924613 - 3925590 | 34033.6 |
| hypothetical protein | PMI12_03775 | Not Available | Negative | 3925674 - 3926651 | 34723.7 |
| 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase | PMI12_03776 | Not Available | Negative | 3926711 - 3927958 | 44803.6 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase | PMI12_03777 | Not Available | Negative | 3927983 - 3928687 | 25443.4 |
| gentisate 1,2-dioxygenase | PMI12_03778 | Not Available | Negative | 3928753 - 3929814 | 38856.1 |
| transcriptional regulator | PMI12_03779 | Not Available | Positive | 3929937 - 3930833 | 33115.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
