Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_03750 | Not Available | Negative | 3895083 - 3895811 | 26029.6 |
| glycosyl transferase possibly involved in lipopolysaccharide synthesis | PMI12_03751 | Not Available | Positive | 3896144 - 3896704 | 20976.1 |
| udp-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferase | PMI12_03752 | Not Available | Positive | 3896728 - 3897300 | 19469.5 |
| putative integral membrane protein | PMI12_03753 | Not Available | Positive | 3897293 - 3897682 | 14273.6 |
| protein-tyrosine-phosphatase | PMI12_03754 | Not Available | Positive | 3897822 - 3898256 | 15903.6 |
| exopolysaccharide transport protein family | PMI12_03755 | Not Available | Positive | 3898253 - 3900511 | 81618.3 |
| putative nucleoside-diphosphate sugar epimerase | PMI12_03756 | Not Available | Positive | 3900709 - 3902697 | 72329.2 |
| hypothetical protein | PMI12_03757 | Not Available | Positive | 3902727 - 3903962 | 43858.6 |
| putative lipoprotein (duf940) | PMI12_03758 | Not Available | Negative | 3904055 - 3907123 | 112654.0 |
| protein of unknown function (duf2886) | PMI12_03759 | Not Available | Negative | 3907072 - 3907698 | 22828.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
