Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide sugar dehydrogenase | PMI12_03740 | Not Available | Positive | 3883580 - 3884863 | 46384.2 |
| nucleoside-diphosphate-sugar epimerase | PMI12_03741 | Not Available | Positive | 3884878 - 3886017 | 41739.5 |
| acetyltransferase (isoleucine patch superfamily) | PMI12_03742 | Not Available | Positive | 3886073 - 3887008 | 34020.6 |
| putative plp-dependent enzyme possibly involved in cell wall biogenesis | PMI12_03743 | Not Available | Positive | 3887005 - 3888111 | 40427.5 |
| membrane protein involved in the export of o-antigen and teichoic acid | PMI12_03744 | Not Available | Positive | 3888104 - 3889606 | 53658.5 |
| glycosyltransferase | PMI12_03745 | Not Available | Positive | 3889647 - 3890744 | 41273.4 |
| hypothetical protein | PMI12_03746 | Not Available | Positive | 3890744 - 3891727 | 37799.8 |
| putative glycosyltransferase | PMI12_03747 | Not Available | Positive | 3892098 - 3892901 | 30216.4 |
| glycosyltransferase | PMI12_03748 | Not Available | Positive | 3892898 - 3893965 | 39521.2 |
| glycosyltransferase | PMI12_03749 | Not Available | Positive | 3894038 - 3895159 | 41280.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
