Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hit family hydrolase, diadenosine tetraphosphate hydrolase | PMI12_03730 | Not Available | Positive | 3874660 - 3875019 | 13176.1 |
| twin arginine-targeting protein translocase, tata/e family | PMI12_03731 | Not Available | Positive | 3875085 - 3875327 | 8507.26 |
| twin arginine-targeting protein translocase tatb | PMI12_03732 | Not Available | Positive | 3875344 - 3875811 | 17223.8 |
| twin arginine targeting protein translocase subunit tatc | PMI12_03733 | Not Available | Positive | 3875877 - 3876686 | 29489.8 |
| trypsin-like serine protease with c-terminal pdz domain containing protein | PMI12_03734 | Not Available | Negative | 3876714 - 3877880 | 40628.7 |
| nitrate/nitrite transporter | PMI12_03735 | Not Available | Positive | 3878177 - 3879529 | 47947.6 |
| dinuclear metal center protein, ybgi/sa1388 family | PMI12_03736 | Not Available | Positive | 3879526 - 3880299 | 27366.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | PMI12_03737 | Not Available | Positive | 3880364 - 3881404 | 35733.2 |
| large conductance mechanosensitive channel protein | PMI12_03738 | Not Available | Negative | 3881401 - 3881832 | 15242.1 |
| periplasmic protein involved in polysaccharide export | PMI12_03739 | Not Available | Positive | 3882220 - 3883446 | 43432.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
