Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazoleglycerol-phosphate dehydratase | PMI12_03720 | Not Available | Positive | 3867048 - 3867656 | 21899.2 |
| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit | PMI12_03721 | Not Available | Positive | 3867676 - 3868335 | 23859.4 |
| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | PMI12_03722 | Not Available | Positive | 3868399 - 3869139 | 26009.2 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_03723 | Not Available | Negative | 3869396 - 3870319 | 33684.6 |
| na+/h+ dicarboxylate symporter | PMI12_03724 | Not Available | Negative | 3870328 - 3871632 | 46419.4 |
| aldose 1-epimerase-like enzyme | PMI12_03725 | Not Available | Positive | 3871806 - 3872639 | 30173.0 |
| imidazoleglycerol phosphate synthase, cyclase subunit | PMI12_03726 | Not Available | Positive | 3872662 - 3873447 | 27331.4 |
| phosphoribosyl-amp cyclohydrolase | PMI12_03727 | Not Available | Positive | 3873489 - 3873878 | 14750.5 |
| phosphoribosyl-atp pyrophosphohydrolase | PMI12_03728 | Not Available | Positive | 3873875 - 3874267 | 14129.6 |
| putative membrane protein | PMI12_03729 | Not Available | Positive | 3874281 - 3874670 | 14726.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
