Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lauroyl/myristoyl acyltransferase | PMI12_03680 | Not Available | Positive | 3823491 - 3824375 | 32799.9 |
| putative hydrolase or acyltransferase of alpha/beta superfamily | PMI12_03681 | Not Available | Negative | 3824472 - 3825383 | 33730.5 |
| ribosome biogenesis gtp-binding protein ysxc/engb | PMI12_03682 | Not Available | Negative | 3825470 - 3826213 | 26953.6 |
| cytochrome c553 | PMI12_03683 | Not Available | Positive | 3826286 - 3826957 | 23286.7 |
| resb protein required for cytochrome c biosynthesis | PMI12_03684 | Not Available | Positive | 3827077 - 3829257 | 79131.6 |
| cytochrome c-type biogenesis protein ccsb | PMI12_03685 | Not Available | Positive | 3829254 - 3830570 | 49321.6 |
| sulfite oxidase-like oxidoreductase | PMI12_03686 | Not Available | Positive | 3830687 - 3831706 | 37751.1 |
| putative membrane protein | PMI12_03687 | Not Available | Positive | 3831734 - 3832390 | 24675.1 |
| diaminopimelate decarboxylase | PMI12_03688 | Not Available | Negative | 3832401 - 3833687 | 45759.0 |
| iron donor protein cyay | PMI12_03689 | Not Available | Positive | 3833969 - 3834301 | 12094.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
