Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative ser protein kinase | PMI12_03660 | Not Available | Negative | 3797654 - 3799576 | 73199.0 |
| chaperone protein dnaj | PMI12_03661 | Not Available | Negative | 3800261 - 3801400 | 41154.6 |
| chaperone protein dnak | PMI12_03662 | Not Available | Negative | 3801509 - 3803446 | 69009.1 |
| molecular chaperone grpe (heat shock protein) | PMI12_03663 | Not Available | Negative | 3803559 - 3804098 | 19209.6 |
| atpase component of abc-type sugar transporter | PMI12_03664 | Not Available | Positive | 3804361 - 3805012 | 23134.9 |
| mannitol-1-phosphate/altronate dehydrogenase | PMI12_03665 | Not Available | Positive | 3805089 - 3806480 | 49888.2 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_03666 | Not Available | Positive | 3806477 - 3807265 | 27410.1 |
| transaldolase | PMI12_03667 | Not Available | Positive | 3807294 - 3807965 | 23632.6 |
| sugar kinase, ribokinase | PMI12_03668 | Not Available | Positive | 3807986 - 3808954 | 34045.5 |
| dna-binding domain-containing protein, arac-type | PMI12_03669 | Not Available | Positive | 3808966 - 3809919 | 35911.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
