Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_03630 | Not Available | Positive | 3771771 - 3772757 | 34080.5 |
| rieske (2fe-2s) domain-containing protein | PMI12_03631 | Not Available | Positive | 3772778 - 3774094 | 50241.5 |
| aromatic ring-cleaving dioxygenase | PMI12_03632 | Not Available | Negative | 3774095 - 3774442 | 13045.4 |
| hypothetical protein | PMI12_03633 | Not Available | Negative | 3774450 - 3774653 | 7791.56 |
| polyketide cyclase / dehydrase and lipid transport | PMI12_03634 | Not Available | Negative | 3774705 - 3775769 | 39443.6 |
| methyltransferase family protein | PMI12_03635 | Not Available | Negative | 3775812 - 3776771 | 35270.1 |
| hypothetical protein | PMI12_03636 | Not Available | Negative | 3776804 - 3777226 | 14892.2 |
| putative transcriptional regulator | PMI12_03637 | Not Available | Negative | 3777286 - 3777870 | 22079.3 |
| dna repair photolyase | PMI12_03638 | Not Available | Positive | 3777988 - 3779082 | 40810.9 |
| transcriptional regulator | PMI12_03639 | Not Available | Positive | 3779451 - 3780353 | 32626.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
