Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-dependent formate dehydrogenase delta subunit fdsd | PMI12_03600 | Not Available | Negative | 3738571 - 3738879 | 10633.6 |
| formate dehydrogenase family accessory protein fdhd | PMI12_03601 | Not Available | Negative | 3738914 - 3739774 | 29968.7 |
| formate dehydrogenase, alpha subunit, archaeal-type | PMI12_03602 | Not Available | Negative | 3739785 - 3742661 | 104614.0 |
| thioesterase of type i polyketide synthase or non-ribosomal peptide synthase like protein | PMI12_03603 | Not Available | Positive | 3742915 - 3744123 | 43524.4 |
| tonb-dependent siderophore receptor | PMI12_03604 | Not Available | Negative | 3744181 - 3746562 | 86696.7 |
| lysine/ornithine n-monooxygenase | PMI12_03605 | Not Available | Negative | 3746731 - 3748032 | 48541.4 |
| folate-dependent phosphoribosylglycinamide formyltransferase purn | PMI12_03606 | Not Available | Negative | 3748099 - 3748935 | 31355.2 |
| siderophore-iron reductase fhuf | PMI12_03607 | Not Available | Negative | 3748979 - 3749719 | 26904.7 |
| cyclic peptide transporter | PMI12_03608 | Not Available | Positive | 3749989 - 3751680 | 61444.1 |
| fe2+-dicitrate sensor, membrane component | PMI12_03609 | Not Available | Negative | 3751743 - 3752798 | 37387.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
