Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | PMI12_03590 | Not Available | Negative | 3726053 - 3727009 | 33466.0 |
| protocatechuate 3,4-dioxygenase, beta subunit | PMI12_03591 | Not Available | Positive | 3727150 - 3727875 | 27435.5 |
| protocatechuate 3,4-dioxygenase, alpha subunit | PMI12_03592 | Not Available | Positive | 3727893 - 3728501 | 22049.8 |
| cytochrome c553 | PMI12_03593 | Not Available | Negative | 3728571 - 3729263 | 24611.5 |
| moxr-like atpase | PMI12_03594 | Not Available | Positive | 3729424 - 3730278 | 32439.3 |
| acetyltransferase, ribosomal protein n-acetylase | PMI12_03595 | Not Available | Positive | 3730295 - 3730882 | 21619.1 |
| hypothetical protein | PMI12_03596 | Not Available | Positive | 3730900 - 3732087 | 46119.0 |
| outer membrane protein | PMI12_03597 | Not Available | Positive | 3732150 - 3734078 | 70247.6 |
| hypothetical protein | PMI12_03598 | Not Available | Positive | 3734078 - 3738163 | 142757.0 |
| hypothetical protein | PMI12_03599 | Not Available | Positive | 3738262 - 3738561 | 10394.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
