Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea abc transporter, atp-binding protein urtd | PMI12_03570 | Not Available | Negative | 3702155 - 3702898 | 27438.4 |
| urea abc transporter, permease protein urtc | PMI12_03571 | Not Available | Negative | 3702917 - 3704107 | 42831.6 |
| urea abc transporter, permease protein urtb | PMI12_03572 | Not Available | Negative | 3704137 - 3705051 | 32538.9 |
| urea abc transporter, urea binding protein | PMI12_03573 | Not Available | Negative | 3705137 - 3706402 | 45875.9 |
| signal transduction histidine kinase | PMI12_03574 | Not Available | Positive | 3706660 - 3710058 | 123322.0 |
| response regulator containing a chey-like receiver domain and a ggdef domain | PMI12_03575 | Not Available | Positive | 3710036 - 3710929 | 31297.0 |
| hypothetical protein | PMI12_03576 | Not Available | Positive | 3711020 - 3711790 | 28448.9 |
| abc-type molybdate transport system, periplasmic component | PMI12_03577 | Not Available | Positive | 3712007 - 3712834 | 28441.4 |
| hypothetical protein | PMI12_03578 | Not Available | Positive | 3713129 - 3714133 | 36326.4 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_03579 | Not Available | Positive | 3714700 - 3715446 | 25785.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
