Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding domain-containing protein, arac-type | PMI12_03550 | Not Available | Positive | 3682338 - 3682796 | 17057.5 |
| lactoylglutathione lyase family protein | PMI12_03551 | Not Available | Positive | 3682822 - 3683232 | 14705.5 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_03552 | Not Available | Positive | 3683328 - 3684497 | 40301.5 |
| camp-binding protein | PMI12_03553 | Not Available | Negative | 3684513 - 3685235 | 25654.4 |
| putative hd phosphohydrolase | PMI12_03554 | Not Available | Positive | 3685339 - 3685932 | 22459.5 |
| ribulose-5-phosphate 4-epimerase-like epimerase or aldolase | PMI12_03555 | Not Available | Positive | 3685968 - 3686735 | 28096.7 |
| transcriptional regulator | PMI12_03556 | Not Available | Positive | 3686791 - 3687717 | 33187.5 |
| precorrin 3b synthase cobz | PMI12_03557 | Not Available | Positive | 3687795 - 3689222 | 51341.9 |
| citb domain protein | PMI12_03558 | Not Available | Positive | 3689206 - 3690438 | 44657.9 |
| hypothetical protein | PMI12_03559 | Not Available | Positive | 3690486 - 3691454 | 33861.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
