Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase, rsme family | PMI12_03540 | Not Available | Negative | 3670770 - 3671495 | 25033.2 |
| aminoglycoside phosphotransferase | PMI12_03541 | Not Available | Negative | 3671531 - 3672628 | 40709.0 |
| organic solvent tolerance protein osta | PMI12_03542 | Not Available | Positive | 3672867 - 3675446 | 95872.6 |
| parvulin-like peptidyl-prolyl isomerase | PMI12_03543 | Not Available | Positive | 3675464 - 3676873 | 50946.3 |
| putative membrane protein | PMI12_03544 | Not Available | Negative | 3677022 - 3677438 | 14569.3 |
| pirin-related protein | PMI12_03545 | Not Available | Negative | 3677519 - 3678220 | 25360.9 |
| transcriptional regulator | PMI12_03546 | Not Available | Positive | 3678381 - 3679334 | 34289.5 |
| putative nad/fad-dependent oxidoreductase | PMI12_03547 | Not Available | Positive | 3679454 - 3680536 | 38985.5 |
| glutamyl-queuosine trna(asp) synthetase | PMI12_03548 | Not Available | Positive | 3680544 - 3681512 | 35009.2 |
| trna (guanine-n(7)-)-methyltransferase | PMI12_03549 | Not Available | Positive | 3681512 - 3682282 | 28237.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
