Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_03530 | Not Available | Positive | 3659271 - 3659858 | 20271.5 |
| kef-type k+ ransport system, predicted nad-binding component | PMI12_03531 | Not Available | Negative | 3659803 - 3660729 | 34133.5 |
| integral membrane protein ccma involved in cell shape determination | PMI12_03532 | Not Available | Positive | 3660844 - 3661362 | 17767.2 |
| hypothetical protein | PMI12_03533 | Not Available | Negative | 3661359 - 3662144 | 29296.9 |
| acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase | PMI12_03534 | Not Available | Positive | 3662236 - 3663747 | 53890.3 |
| lysophospholipase | PMI12_03535 | Not Available | Positive | 3663744 - 3664601 | 30414.3 |
| arabinose efflux permease family protein | PMI12_03536 | Not Available | Negative | 3664573 - 3665754 | 41125.2 |
| hypothetical protein | PMI12_03537 | Not Available | Negative | 3665751 - 3668663 | 106718.0 |
| hypothetical protein | PMI12_03538 | Not Available | Negative | 3668767 - 3669219 | 14785.8 |
| acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase | PMI12_03539 | Not Available | Negative | 3669320 - 3670678 | 47142.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
