Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_03519 | Not Available | Positive | 3649473 - 3650432 | 33276.8 |
| transporter, monovalent cation:proton antiporter-2 (cpa2) family | PMI12_03520 | Not Available | Negative | 3650492 - 3652477 | 71370.9 |
| kpsf/gutq family protein | PMI12_03521 | Not Available | Positive | 3652655 - 3653656 | 34790.5 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase, yrbi family | PMI12_03522 | Not Available | Positive | 3653656 - 3654204 | 19741.8 |
| hypothetical protein | PMI12_03523 | Not Available | Positive | 3654201 - 3654851 | 23676.2 |
| short-chain dehydrogenase of unknown substrate specificity | PMI12_03524 | Not Available | Positive | 3654852 - 3655634 | 27309.9 |
| rrm domain-containing rna-binding protein | PMI12_03525 | Not Available | Negative | 3655718 - 3656257 | 16396.8 |
| putative membrane protein | PMI12_03527 | Not Available | Positive | 3656713 - 3657276 | 20212.4 |
| homoserine o-acetyltransferase | PMI12_03528 | Not Available | Positive | 3657540 - 3658664 | 41323.8 |
| methionine biosynthesis protein metw | PMI12_03529 | Not Available | Positive | 3658661 - 3659251 | 21918.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
