Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_03489 | Not Available | Positive | 3620778 - 3621620 | 29263.1 |
| thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase | PMI12_03490 | Not Available | Positive | 3621613 - 3623310 | 59313.9 |
| putative dinucleotide-utilizing enzyme | PMI12_03491 | Not Available | Positive | 3623325 - 3624122 | 26784.4 |
| nad-dependent aldehyde dehydrogenase | PMI12_03492 | Not Available | Positive | 3624131 - 3625609 | 53022.3 |
| putative ring-cleavage extradiol dioxygenase | PMI12_03493 | Not Available | Positive | 3625606 - 3626577 | 35445.6 |
| hypothetical protein | PMI12_03494 | Not Available | Positive | 3626666 - 3626872 | 7573.08 |
| putative acyltransferase | PMI12_03495 | Not Available | Positive | 3626869 - 3627636 | 27979.1 |
| pirin-related protein | PMI12_03496 | Not Available | Positive | 3627703 - 3628599 | 32678.6 |
| nadph-dependent fmn reductase | PMI12_03497 | Not Available | Positive | 3628677 - 3629750 | 39761.0 |
| protein of unknown function (duf1520) | PMI12_03498 | Not Available | Positive | 3629902 - 3630474 | 20517.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
