Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_03479 | Not Available | Positive | 3609867 - 3610157 | 10849.8 |
| hypothetical protein | PMI12_03480 | Not Available | Negative | 3610402 - 3611226 | 32226.4 |
| alanine--trna ligase | PMI12_03481 | Not Available | Positive | 3611475 - 3614099 | 94401.4 |
| 2-dehydropantoate 2-reductase | PMI12_03482 | Not Available | Positive | 3614133 - 3615149 | 35718.8 |
| glycine/d-amino acid oxidase, deaminating | PMI12_03483 | Not Available | Positive | 3615203 - 3616462 | 45272.8 |
| hypothetical protein | PMI12_03484 | Not Available | Positive | 3616644 - 3617627 | 33702.7 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_03485 | Not Available | Positive | 3617640 - 3618455 | 28070.0 |
| cupin domain-containing protein | PMI12_03486 | Not Available | Positive | 3618486 - 3619031 | 20355.3 |
| putative hydrolase or acyltransferase of alpha/beta superfamily | PMI12_03487 | Not Available | Positive | 3619043 - 3619903 | 29606.5 |
| transcriptional regulator | PMI12_03488 | Not Available | Positive | 3619945 - 3620781 | 30675.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
