Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein spar/ysct/hrct | PMI12_03469 | Not Available | Positive | 3585757 - 3586536 | 28136.1 |
| flagellar biosynthesis pathway, component flhb | PMI12_03470 | Not Available | Positive | 3586547 - 3587578 | 38195.7 |
| hypothetical protein | PMI12_03471 | Not Available | Positive | 3587613 - 3603560 | 565958.0 |
| transcriptional regulator | PMI12_03472 | Not Available | Negative | 3603543 - 3604463 | 33820.7 |
| hypothetical protein | PMI12_03473 | Not Available | Positive | 3604616 - 3605596 | 34307.9 |
| n-formylglutamate amidohydrolase | PMI12_03474 | Not Available | Positive | 3605611 - 3606477 | 31652.7 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_03475 | Not Available | Positive | 3606885 - 3607796 | 33778.6 |
| Trna-gly | Not Available | Not Available | Positive | 3607841 - 3607914 | Not Available |
| cupin superfamily protein | PMI12_03477 | Not Available | Positive | 3608173 - 3609156 | 36875.0 |
| hypothetical protein | PMI12_03478 | Not Available | Positive | 3609418 - 3609693 | 10088.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
