Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_03429 | Not Available | Negative | 3537781 - 3538533 | 25887.1 |
| hypothetical protein | PMI12_03430 | Not Available | Positive | 3538689 - 3540143 | 52135.9 |
| transcriptional regulator | PMI12_03431 | Not Available | Positive | 3540222 - 3541064 | 29859.1 |
| hypothetical protein | PMI12_03432 | Not Available | Positive | 3541118 - 3542413 | 47239.1 |
| hypothetical protein | PMI12_03433 | Not Available | Positive | 3542410 - 3542859 | 16109.4 |
| dihydroxyacid dehydratase/phosphogluconate dehydratase | PMI12_03434 | Not Available | Positive | 3542856 - 3544556 | 59005.4 |
| hypothetical protein | PMI12_03435 | Not Available | Positive | 3544677 - 3545804 | 39368.2 |
| hypothetical protein | PMI12_03436 | Not Available | Positive | 3545816 - 3546778 | 33830.1 |
| putative oxidoreductase, aryl-alcohol dehydrogenase like protein | PMI12_03437 | Not Available | Negative | 3546765 - 3547592 | 30130.3 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_03438 | Not Available | Negative | 3547787 - 3548917 | 39898.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
