Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | PMI12_03399 | Not Available | Positive | 3503583 - 3504056 | 16670.9 |
| protein of unknown function (duf3297) | PMI12_03400 | Not Available | Positive | 3504089 - 3504337 | 9233.17 |
| hypothetical protein | PMI12_03401 | Not Available | Negative | 3504344 - 3505210 | 31098.6 |
| pas domain s-box/diguanylate cyclase (ggdef) domain-containing protein | PMI12_03402 | Not Available | Negative | 3505420 - 3508440 | 111408.0 |
| transcriptional regulator | PMI12_03403 | Not Available | Negative | 3508502 - 3509398 | 32003.6 |
| amidase, asp-trnaasn/glu-trnagln amidotransferase a subunit | PMI12_03404 | Not Available | Positive | 3509510 - 3510919 | 50051.6 |
| hypothetical protein | PMI12_03405 | Not Available | Positive | 3510973 - 3511944 | 34354.4 |
| arabinose efflux permease family protein | PMI12_03406 | Not Available | Positive | 3512024 - 3513430 | 48298.0 |
| beta-lactamase class a | PMI12_03407 | Not Available | Positive | 3513559 - 3514446 | 30735.8 |
| transcriptional regulator | PMI12_03408 | Not Available | Negative | 3514454 - 3515485 | 36843.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
