Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase i | PMI12_03389 | Not Available | Negative | 3496562 - 3497134 | 21202.6 |
| dipeptidase, putative | PMI12_03390 | Not Available | Positive | 3497195 - 3498928 | 61800.4 |
| hypothetical protein | PMI12_03391 | Not Available | Negative | 3498931 - 3499248 | 11484.7 |
| dnaj-class molecular chaperone with c-terminal zn finger domain containing protein | PMI12_03392 | Not Available | Negative | 3499251 - 3500213 | 35394.5 |
| fructose-2,6-bisphosphatase | PMI12_03393 | Not Available | Negative | 3500268 - 3500909 | 22412.8 |
| glutathione s-transferase | PMI12_03394 | Not Available | Negative | 3500925 - 3501506 | 21640.4 |
| phosphatidylserine synthase | PMI12_03395 | Not Available | Negative | 3501533 - 3502129 | 20891.6 |
| gmp synthase family protein | PMI12_03396 | Not Available | Negative | 3502279 - 3502809 | 18710.1 |
| hypothetical protein | PMI12_03397 | Not Available | Negative | 3502824 - 3503018 | 7420.92 |
| hypothetical protein | PMI12_03398 | Not Available | Positive | 3503127 - 3503582 | 15675.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
