Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-aminobutyrate permease-like transporter | PMI12_03369 | Not Available | Positive | 3474769 - 3476172 | 50217.8 |
| aspartate/tyrosine/aromatic aminotransferase | PMI12_03370 | Not Available | Negative | 3476169 - 3477335 | 41769.4 |
| transcriptional regulator | PMI12_03371 | Not Available | Negative | 3477366 - 3478319 | 35088.2 |
| methylmalonic acid semialdehyde dehydrogenase | PMI12_03372 | Not Available | Positive | 3478498 - 3480021 | 53930.1 |
| acyl-coa dehydrogenase | PMI12_03373 | Not Available | Positive | 3480034 - 3481188 | 41030.8 |
| enoyl-coa hydratase/carnithine racemase | PMI12_03374 | Not Available | Positive | 3481218 - 3482333 | 40818.1 |
| 3-hydroxyisobutyrate dehydrogenase | PMI12_03375 | Not Available | Positive | 3482378 - 3483274 | 29868.4 |
| hypothetical protein | PMI12_03376 | Not Available | Negative | 3483289 - 3483447 | 5595.81 |
| arabinose efflux permease family protein | PMI12_03377 | Not Available | Negative | 3483419 - 3484702 | 43992.1 |
| transcriptional regulator | PMI12_03378 | Not Available | Positive | 3484863 - 3485846 | 35510.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
