Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative peroxidase-related enzyme | PMI12_03349 | Not Available | Negative | 3455038 - 3455619 | 21852.3 |
| phosphoserine phosphatase | PMI12_03350 | Not Available | Negative | 3455696 - 3456958 | 46146.1 |
| ethanolamine ammonia-lyase, small subunit | PMI12_03351 | Not Available | Negative | 3457152 - 3457940 | 28125.5 |
| ethanolamine ammonia-lyase, large subunit | PMI12_03352 | Not Available | Negative | 3457937 - 3459331 | 49855.9 |
| ethanolamine permease | PMI12_03353 | Not Available | Negative | 3459335 - 3460762 | 50421.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | PMI12_03354 | Not Available | Positive | 3460908 - 3461318 | 14144.0 |
| periplasmic glucans biosynthesis protein | PMI12_03355 | Not Available | Negative | 3461344 - 3462945 | 59075.1 |
| o-methyltransferase involved in polyketide biosynthesis | PMI12_03356 | Not Available | Negative | 3463120 - 3464007 | 32921.9 |
| transcriptional activator of acetoin/glycerol metabolism | PMI12_03357 | Not Available | Negative | 3464060 - 3465931 | 67066.8 |
| nad-dependent aldehyde dehydrogenase | PMI12_03358 | Not Available | Positive | 3466147 - 3467667 | 55872.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
