Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | PMI12_03339 | Not Available | Negative | 3444657 - 3445676 | 35611.8 |
| flavin-dependent dehydrogenase | PMI12_03340 | Not Available | Negative | 3445793 - 3447490 | 62036.3 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_03341 | Not Available | Positive | 3447613 - 3448395 | 27451.0 |
| eama-like transporter family | PMI12_03342 | Not Available | Positive | 3448473 - 3449246 | 27061.5 |
| putative thioesterase | PMI12_03343 | Not Available | Positive | 3449243 - 3449665 | 15937.2 |
| signal transduction histidine kinase | PMI12_03344 | Not Available | Negative | 3449686 - 3451038 | 49668.1 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_03345 | Not Available | Negative | 3451035 - 3451709 | 24731.7 |
| pap2 (acid phosphatase) superfamily protein | PMI12_03346 | Not Available | Positive | 3451852 - 3452556 | 25290.0 |
| pap2 superfamily protein | PMI12_03347 | Not Available | Positive | 3452543 - 3453133 | 21254.7 |
| putative membrane-associated, metal-dependent hydrolase | PMI12_03348 | Not Available | Positive | 3453180 - 3454931 | 64262.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
