Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_03265 | Not Available | Positive | 3416553 - 3416672 | 4386.58 |
| beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase | PMI12_03266 | Not Available | Negative | 3416815 - 3417705 | 30290.9 |
| nad-dependent aldehyde dehydrogenase | PMI12_03267 | Not Available | Negative | 3417713 - 3419161 | 50890.4 |
| amidase, asp-trnaasn/glu-trnagln amidotransferase a subunit | PMI12_03268 | Not Available | Negative | 3419184 - 3420596 | 50521.4 |
| abc-type dipeptide transport system, periplasmic component | PMI12_03269 | Not Available | Negative | 3420601 - 3422094 | 54264.1 |
| atpase component of various abc-type transport systems with duplicated atpase domain | PMI12_03270 | Not Available | Negative | 3422145 - 3422904 | 27759.4 |
| non-ribosomal peptide synthase | PMI12_03271 | Not Available | Negative | 3422905 - 3423505 | 22112.4 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_03272 | Not Available | Negative | 3423506 - 3424528 | 36407.7 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_03273 | Not Available | Negative | 3424575 - 3425771 | 42734.9 |
| hypothetical protein | PMI12_03274 | Not Available | Negative | 3425812 - 3426012 | 7474.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
