Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formamidopyrimidine-dna glycosylase fpg | PMI12_03255 | Not Available | Negative | 3408801 - 3409667 | 31649.7 |
| hypothetical protein | PMI12_03256 | Not Available | Positive | 3409802 - 3411547 | 63756.0 |
| outer membrane lipoprotein involved in outer membrane biogenesis | PMI12_03257 | Not Available | Positive | 3411692 - 3412069 | 13352.9 |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | PMI12_03258 | Not Available | Positive | 3412066 - 3412962 | 31993.4 |
| Trna-gln | Not Available | Not Available | Positive | 3413033 - 3413109 | Not Available |
| ribose-phosphate pyrophosphokinase | PMI12_03260 | Not Available | Positive | 3413250 - 3414224 | 35097.4 |
| ribosomal protein l25, ctc-form | PMI12_03261 | Not Available | Positive | 3414311 - 3414994 | 24352.4 |
| peptidyl-trna hydrolase | PMI12_03262 | Not Available | Positive | 3415074 - 3415706 | 23027.9 |
| hypothetical protein | PMI12_03263 | Not Available | Positive | 3415827 - 3416243 | 15185.3 |
| nadh:ubiquinone oxidoreductase chain i-like protein | PMI12_03264 | Not Available | Negative | 3416240 - 3416506 | 9879.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
