Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate dehydrogenase-like oxidoreductase | PMI12_03245 | Not Available | Negative | 3398662 - 3399540 | 31700.7 |
| hypothetical protein | PMI12_03246 | Not Available | Positive | 3399697 - 3400521 | 30616.7 |
| transposase is66 family | PMI12_03247 | Not Available | Negative | 3400534 - 3400734 | 7328.69 |
| Trna-met | Not Available | Not Available | Positive | 3401060 - 3401136 | Not Available |
| heat shock repressor hrca | PMI12_03249 | Not Available | Negative | 3401167 - 3402174 | 36984.5 |
| putative sugar kinase | PMI12_03250 | Not Available | Positive | 3402206 - 3403117 | 32650.0 |
| dna repair protein recn | PMI12_03251 | Not Available | Positive | 3403119 - 3404801 | 59699.4 |
| putative p-loop-containing kinase | PMI12_03252 | Not Available | Positive | 3404798 - 3405676 | 32910.4 |
| a/g-specific adenine glycosylase | PMI12_03253 | Not Available | Negative | 3405681 - 3406715 | 38158.0 |
| dynamin family protein | PMI12_03254 | Not Available | Negative | 3406750 - 3408711 | 73305.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
